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HPLC Separation Mechanisms

Retention Mechanisms

In general, three primary characteristics of chemicals can be used to create HPLC separations. They are:

  • Polarity
  • Electrical Charge
  • Molecular Size

First, we’ll discuss an overview of Polarity and the two Retention Mechanisms which employ this characteristic; Normal Phase and Reversed-Phase chromatography.

Polarity

All chemicals have a unique behavioral characteristic related to their molecular structure. They can be described as being “ Polar ” or “ Non-Polar ”, with a range of polarities between the most polar and most non-polar.

Depending on the structure of the molecule and its’ electron charge distribution, molecules will be “Very Polar” and some will be “Very Non-Polar”. Others will have different degrees of polarity between these two, so there is a range of polarity. For any individual compound molecule, it will have a “certain polarity” within that range. Water is a good example of a very Polar liquid, and paraffin based oil is a good example of a very Non-Polar liquid.

We use this “polarity” characteristic of chemicals to build chromatographic “ Retention Mechanisms ” that are used to create many HPLC separations. Because of polarity, there can be either “Attraction”, “No Attraction”, or “Repulsion” between two chemical species.

A simple rule describes this behavior for polarity-based retention mechanisms: “Like Attracts Like, and Opposites are Not Attracted When We Use Polarity”

Polars will attract Polars (like), and repel Non-Polars (opposites). Non-Polars will attract Non-Polars (like), and repel Polars (opposites). Oil, which is non-polar, does not mix with water, which is polar (opposites repel!) (This is just the reverse of magnetism, where opposite poles of the magnet attract, and like poles repel).

To make a chromatographic separation system, we create a “Competition” for the different sample compounds by making the mobile phase and the stationary phase have different polarities. Since the compounds in the sample will have different polarities, compounds which have the same polarity as the stationary phase (column packing material) will slow down (because they are attracted to the particles). Any compounds that have the same polarity as the moving mobile phase (attracted), will move along at a faster speed. We have created a separation by changing the relative attractions (and, therefore the speeds) of each compound.

The chromatographer carefully chooses the polarity of the mobile phase and stationary phase to develop the competition needed for the HPLC separation of the sample compounds.

As shown above, water is one of the most polar mobile phase solvents while hexane is one of the most non-polar solvents. Miscible solvents can be blended in different proportions to create the exact separation performance required.

Here, the stationary phase/packing material polarity range is shown. Particles of pure silica which are not bonded, are the most polar. Column manufacturers can change the polarity by chemically bonding a modifier to the silica particle surface. For example, by bonding C18 (or “OctaDecylSilane, ODS”) to the surface, the particle can be made to be very non-polar (very “Hydrophobic”). Today in HPLC, a bonded C18 – silica particle is the most popular type. Looking at the sample polarity below, the different compounds in the sample will typically have different polarities with which the chromatographer will be able to separate with the competition developed between the mobile phase and stationary phase conditions. Now, we can discuss the retention mechanisms based on Polarity. Remember, “Like Attracts Like”

Normal Phase

Thinking back to the Tswett experiment with plant extracts, the conditions he used were basically to have a very POLAR Stationary Phase (in the column) and a more non-POLAR Mobile Phase to create the competition for separation. When we use these same conditions today, this mode of chromatography is called, “NORMAL PHASE”.

The Polar sample compounds will be attracted to the Polar Stationary Phase and slow down. The Non-Polar compounds in the sample will be attracted to the Non-Polar Mobile Phase and move faster to create the separation. The mobile phase will be 100% organic solvent. No water is present. Remember that in Normal Phase chromatography, the Stationary Phase is Polar, therefore, a Polar compound(s) (Yellow) will be retained, and the Non-Polar(s) (Blue), will elute early.

 
 

 

Reversed Phase

If we “reverse” the conditions used in Normal Phase chromatography, now the Stationary Phase is Non-Polar (hydrophobic), and the Mobile Phase is Polar. This is called REVERSED-PHASE chromatography.

Here, the sample compounds, which are Non-Polar, will be attracted to the Non-Polar Stationary Phase and slow down, while the Polar compounds in the sample will be attracted to the Polar Mobile Phase and move faster. Remember, that in Reversed-Phase chromatography, the Stationary Phase is Non-Polar, therefore the Non Polar compound(s) (Blue) will be retained, and the Polar(s) (Yellow) will elute early.

Today, approximately 75% of all HPLC methods utilize Reversed-Phase chromatographic conditions because they tend to provide reproducible results. Most methods will utilize a blend of water (aqueous) with a miscible organic solvent to insure the proper interaction of the sample compounds with the non-polar, hydrophobic particle surface. As mentioned earlier, the most popular type of reversed-phase column is a “C18” stationary phase, also referred to as an “ODS” column.

an interactive chart which compares different types of reversed-phase packing materials.

Summary Table    
     
Retention Mechanism Particle (Stationary Phase) Mobile Phase
Normal Phase POLAR Non-POLAR
Reversed-Phase Non-POLAR POLAR

HILIC (Hydrophilic-Interaction Chromatography)

HPLC done in the HILIC mode features the use a very polar stationary phase column to retain polar compounds. This is similar to Normal Phase chromatography with one major difference in the mobile phase conditions. In Normal Phase, the mobile phase is 100% organic solvent. No water is present. In HILIC, water is always present in the mobile phase. We are retaining polar compounds because of their attraction to the polar stationary phase particle surface. Water, which is a very polar solvent, is used as the elution solvent for the polar compounds. A HILIC separation can be achieved using either an isocratic or gradient mode. When using a gradient mode, the initial mobile phase will have a low concentration of water, approximately 5% water (95% acetonitrile), to promote retention of the polar compounds. The concentration of water (elution solvent) is then increased during the gradient, to elute the polar compounds from the column.

Hydrophobic-Interaction Chromatography (HIC)

This mode of chromatography is typically used for proteins and other large biomolecules. A moderately hydrophobic, reversed-phase packing material (stationary phase) is used but with very different mobile phase conditions, because these samples can be adversely affected when exposed to organic solvents that are typically used in reversed-phase methods. Here, the sample is loaded onto the column in very-high-salt concentration, aqueous mobile phase. This causes the compounds to “salt out” and be retained on the packing material. For elution, a gradient is run from the initial high salt, to a low salt concentration. This allows the compounds to go back into the mobile phase and be eluted. No organics are used so that the proteins do not denature.

Ion-Exchange Chromatography

In this mode of HPLC, the stationary phase particle has a charge (positive or negative). Ionized compounds with the opposite charge will be attracted to the particle surface (ion–exchange) and be retained (slowed down). The compounds can be eluted by one or two approaches. First, adjust the pH of the mobile phase to create the un-ionized form of the compound (no charge), which shuts off the ion-exchange mechanism and allows the compound to elute from the column. The second approach is to add counter ions to the mobile phase which are more highly attracted to the charged particles in the stationary phase, thus replacing the compound from the particle surface and allowing it to elute from the column.

Size Exclusion Chromatography (Gel Permeation Chromatography)

Size Exclusion Chromatography is an HPLC technique where the different sizes of the compounds are used to create the separation. There is no chemical attraction involved. The stationary phase particles have openings, called pores, which are of a controlled size. Simplistically, if the size of compound A in solution, (which is related to its’ molecular weight (MW)) is too large to fit into the particle’s pore, it can just pass by the particle, being carried down the length of the column by the mobile phase. However, if compound B is small enough (lower molecular weight) to fit inside the pore, then it will spend some time in a pore before it eventually comes back out. As this process continues down the full length of the column, compound A will be able to elute from the column first, while compound B will be delayed in time, (more retained), thus creating a separation based on compound size.

A simple phrase to summarize Size Exclusion Chromatography is: “Big Ones Come Out First”

This technique is very useful in characterizing the molecular weight distribution of polymers, or the relative amounts of larger molecular weight components to the smaller components in the polymer sample. From the elution pattern on the chromatogram, you can determine the molecular weight distribution for the polymer. This distribution determines the physical properties performance of the polymer, which is important for quality control.

Size Exclusion Chromatography (Gel Filtration Chromatography)

Molecules, such as proteins, DNA and peptides, can also be separated by size. This is often called Gel Filtration Chromatography.